PLEKHG1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PLEKHG1 mutation is significantly associated with the RNA expression of many other genes, with 5,655 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PLEKHG1-associated genes across cancer lineages are NDUFA6, RN7SKP264, and PKN2. Each is linked with PLEKHG1 in more than 3 cancer types. Because this analysis shows association rather than direction, both PLEKHG1-to-partner and partner-to-PLEKHG1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NDUFA6 grouped by PLEKHG1-low versus PLEKHG1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PLEKHG1→partner) and Y-score (partner→PLEKHG1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNDUFA6 →+0.474+1.721<.001<.00134
LIHCRN7SKP264 →+0.162+5.033<.001.00933
STADPKN2 →+0.560+3.286.009.00833
UCECCENPU →+0.719+2.110<.001<.00133
UCECPOLR3K →+0.425+3.544<.001<.00133
UCECRBBP4 →+0.394+1.555.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,655 associations by consensus.

NDUFA6 by PLEKHG1 expression — UCEC

Box plot of NDUFA6 in PLEKHG1-low vs PLEKHG1-high samples in UCEC.

Explore this box plot interactively →

Exploration