PLEK

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PLEK protein abundance is significantly associated with the RNA expression of many other genes, with 3,650 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible PLEK-associated genes across cancer lineages are PLPP2, ZC3H12B, and BTBD10. Each is linked with PLEK in more than 4 cancer types. Because this analysis shows association rather than direction, both PLEK-to-partner and partner-to-PLEK results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PLEK versus PLPP2 in LIVER, with a Pearson correlation of -0.71.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PLEK→partner) and Y-score (partner→PLEK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LIVERPLPP2 →-3.149-1.266.002.00325
BLOOD_LeukemiaZC3H12B →-0.743-0.838<.001<.00134
BLOOD_MyelomaBTBD10 →-0.718-0.878<.001.00134
BLOOD_MyelomaGOLGA6L9 →-1.237-0.923<.001.00234
BLOOD_MyelomaGOLGA6L10 →-0.993-0.932.001.00134
LUNG_NSCLC_LUADNBEAL2 →-1.466-1.099.009.00934
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,650 associations by consensus.

PLEK vs PLPP2 — LIVER

Per-sample scatter of PLEK vs PLPP2 in LIVER (Pearson r = -0.71).

Explore this scatter interactively →

Exploration