PLCXD2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PLCXD2 mutation is significantly associated with the RNA expression of many other genes, with 14 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible PLCXD2-associated genes across cancer lineages are PRAC1, SPINK6, and OR11H2. Each is linked with PLCXD2 in more than 1 cancer types. Because this analysis shows association rather than direction, both PLCXD2-to-partner and partner-to-PLCXD2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PRAC1 grouped by PLCXD2-low versus PLCXD2-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PLCXD2→partner) and Y-score (partner→PLCXD2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaPRAC1 →+2.030+3.832.001.00331
BLOOD_LymphomaSPINK6 →+0.602+3.342<.001.00831
BLOOD_LymphomaOR11H2 →+0.019+3.342.002.00831
BLOOD_LymphomaOR2L8 →+0.021+3.584<.001.00431
BLOOD_LeukemiaPRSS54 →+0.027+5.124<.001<.00131
BLOOD_LeukemiaDEFA5 →+0.231+3.855.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 14 associations by consensus.

PRAC1 by PLCXD2 expression — BLOOD_Lymphoma

Box plot of PRAC1 in PLCXD2-low vs PLCXD2-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration