PLA2G2A

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PLA2G2A mutation is significantly associated with the RNA expression of many other genes, with 522 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PLA2G2A-associated genes across cancer lineages are RPL22P8, ORC5, and METTL2B. Each is linked with PLA2G2A in more than 2 cancer types. Because this analysis shows association rather than direction, both PLA2G2A-to-partner and partner-to-PLA2G2A results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PLA2G2A→partner) and Y-score (partner→PLA2G2A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADRPL22P8 →+0.273+4.038.001.00133
UCECORC5 →+0.478+3.223.004.00932
UCECMETTL2B →+0.374+3.721.008<.00132
LUADKRT18P14 →+0.218+3.596<.001.00632
LUADPSMC1P12 →+0.063+3.323<.001.00232
LUADMRPS16P2 →+0.073+3.572<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 522 associations by consensus.

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