PKIA

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PKIA protein abundance is significantly associated with the RNA expression of many other genes, with 13,288 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PKIA-associated genes across cancer lineages are CNRIP1, TCF4, and CCDC80. Each is linked with PKIA in more than 5 cancer types. Because this analysis shows association rather than direction, both PKIA-to-partner and partner-to-PKIA results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PKIA versus CNRIP1 in UCEC, with a Pearson correlation of 0.76.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PKIA→partner) and Y-score (partner→PKIA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCNRIP1 →+1.555+1.263.002.00836
UCECTCF4 →+1.267+1.506.002<.00136
UCECCCDC80 →+2.393+1.646<.001<.00136
CCRCCC14orf132 →+0.975+0.901.002.00135
PDACPKIA-AS1 →+0.649+0.951<.001<.00135
BRCAZNF831 →+0.699+0.903<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,288 associations by consensus.

PKIA vs CNRIP1 — UCEC

Per-sample scatter of PKIA vs CNRIP1 in UCEC (Pearson r = 0.76).

Explore this scatter interactively →

Exploration