PIWIL4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PIWIL4 mutation is significantly associated with the RNA expression of many other genes, with 4,091 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PIWIL4-associated genes across cancer lineages are RN7SKP245, CPLX3, and RN7SL248P. Each is linked with PIWIL4 in more than 1 cancer types. Because this analysis shows association rather than direction, both PIWIL4-to-partner and partner-to-PIWIL4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SKP245 grouped by PIWIL4-low versus PIWIL4-high in CESC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PIWIL4→partner) and Y-score (partner→PIWIL4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CESCRN7SKP245 →+0.130+5.812<.001.00332
CESCCPLX3 →+0.022+6.342<.001.00132
UCECRN7SL248P →+0.039+2.513<.001.00432
UCECH2AC16 →+0.406+1.642.002<.00132
LIHCPNKDP1 →+0.094+3.019.006.00932
LIHCGSTM5P1 →+0.099+3.816<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,091 associations by consensus.

RN7SKP245 by PIWIL4 expression — CESC

Box plot of RN7SKP245 in PIWIL4-low vs PIWIL4-high samples in CESC.

Explore this box plot interactively →

Exploration