PITPNM3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PITPNM3 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,030 significant associations in total. BONE shows the largest number of these associations.

The most reproducible PITPNM3-associated GO terms across cancer lineages are mRNA transport, Nucleic acid transport, and RNA transport. Each is linked with PITPNM3 in more than 10 cancer types. Because this analysis shows association rather than direction, both PITPNM3-to-partner and partner-to-PITPNM3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, mRNA transport grouped by PITPNM3-low versus PITPNM3-high in OESOPHAGUS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PITPNM3→partner) and Y-score (partner→PITPNM3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSmRNA transport →+0.130+1.373<.001.006211
SOFT_TISSUENucleic acid transport →+0.079+2.239<.001<.00139
SOFT_TISSUERNA transport →+0.079+2.239<.001<.00139
SOFT_TISSUERNA export from nucleus →+0.074+1.245<.001<.00139
SKINBlood coagulation, extrinsic pathway →+1.109+0.831.001.00339
LARGE_INTESTINEPositive regulation of GTPase activity →+0.059+0.920<.001.00939
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,030 associations by consensus.

mRNA transport by PITPNM3 expression — OESOPHAGUS

Box plot of mRNA transport in PITPNM3-low vs PITPNM3-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration