PIMREG

Across TCGA cell cohorts, PIMREG mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible PIMREG-associated genes across cancer lineages are MSGN1 and KRTAP10-2. Each is linked with PIMREG in more than 1 cancer types. Because this analysis shows association rather than direction, both PIMREG-to-partner and partner-to-PIMREG results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MSGN1 grouped by PIMREG-low versus PIMREG-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PIMREG→partner) and Y-score (partner→PIMREG) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	MSGN1 →	+0.082	+3.345	<.001	.007	3	1
LARGE_INTESTINE	KRTAP10-2 →	+0.061	+3.994	<.001	.002	3	1

Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

MSGN1 by PIMREG expression — LARGE_INTESTINE

Explore this box plot interactively →