PIK3R2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PIK3R2 mutation is significantly associated with the RNA expression of many other genes, with 39 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible PIK3R2-associated genes across cancer lineages are C20orf85, IL22, and COX4I2. Each is linked with PIK3R2 in more than 1 cancer types. Because this analysis shows association rather than direction, both PIK3R2-to-partner and partner-to-PIK3R2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, C20orf85 grouped by PIK3R2-low versus PIK3R2-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PIK3R2→partner) and Y-score (partner→PIK3R2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaC20orf85 →+0.024+3.969<.001.00931
BLOOD_LeukemiaIL22 →+0.025+4.569<.001.00331
BLOOD_LeukemiaCOX4I2 →+0.336+3.691<.001.00231
BLOOD_LeukemiaNPHS1 →+0.274+3.816.006.00431
BLOOD_LeukemiaOR4D9 →+0.003+3.969<.001.00931
BLOOD_LeukemiaOR10K1 →+0.433+3.234<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 39 associations by consensus.

C20orf85 by PIK3R2 expression — BLOOD_Leukemia

Box plot of C20orf85 in PIK3R2-low vs PIK3R2-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration