PIGZ

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PIGZ protein abundance is significantly associated with the RNA expression of many other genes, with 1,703 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PIGZ-associated genes across cancer lineages are RNU6-429P, RBMX2, and C17orf64. Each is linked with PIGZ in more than 1 cancer types. Because this analysis shows association rather than direction, both PIGZ-to-partner and partner-to-PIGZ results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PIGZ versus RNU6-429P in GBM, with a Pearson correlation of -0.41.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PIGZ→partner) and Y-score (partner→PIGZ) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMRNU6-429P →-1.245-0.796.002<.00132
PDACRBMX2 →-0.530-1.909.008<.00131
PDACC17orf64 →-0.241-1.909.002<.00131
PDACRPN1 →-0.628-1.909.007<.00131
PDACRAB40C →+0.333+0.503.003.00831
PDACRPS29P17 →+1.223+0.503.006.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,703 associations by consensus.

PIGZ vs RNU6-429P — GBM

Per-sample scatter of PIGZ vs RNU6-429P in GBM (Pearson r = -0.41).

Explore this scatter interactively →

Exploration