PIGS

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PIGS mutation is significantly associated with the total protein of many other genes, with 17 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PIGS-associated genes across cancer lineages are ERK2, Heregulin, and IGFBP2. Each is linked with PIGS in more than 1 cancer types. Because this analysis shows association rather than direction, both PIGS-to-partner and partner-to-PIGS results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ERK2 grouped by PIGS-low versus PIGS-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PIGS→partner) and Y-score (partner→PIGS) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECERK2 →+0.254+2.459.006.02031
UCECHeregulin →-0.149-2.459.012.02031
UCECIGFBP2 →-0.683-3.000.029.03622
UCECJNK_pT183_Y185 →-0.236-3.169.003.01931
UCECPEA-15 →+0.185+2.459.041.02031
UCECSTAT3_pY705 →-0.442-3.159<.001.01931
Each partner links to its Q-omics profile. Showing the 6 strongest of 17 associations by consensus.

ERK2 by PIGS expression — UCEC

Box plot of ERK2 in PIGS-low vs PIGS-high samples in UCEC.

Explore this box plot interactively →

Exploration