PIGK

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PIGK mutation is significantly associated with the RNA expression of many other genes, with 2,570 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PIGK-associated genes across cancer lineages are RNU6-75P, LIN7C, and COX15. Each is linked with PIGK in more than 1 cancer types. Because this analysis shows association rather than direction, both PIGK-to-partner and partner-to-PIGK results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-75P grouped by PIGK-low versus PIGK-high in READ.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PIGK→partner) and Y-score (partner→PIGK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
READRNU6-75P →+0.608+5.925<.001.00232
UCECLIN7C →+0.613+3.130<.001<.00132
UCECCOX15 →+0.368+2.095.002.00332
UCECDLAT →+0.599+2.939<.001<.00132
UCECC18orf25 →+0.460+2.917<.001<.00132
UCECRAD17 →+0.454+2.436<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,570 associations by consensus.

RNU6-75P by PIGK expression — READ

Box plot of RNU6-75P in PIGK-low vs PIGK-high samples in READ.

Explore this box plot interactively →

Exploration