PIGF

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PIGF RNA expression is significantly associated with the protein abundance of many other proteins, with 12,117 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PIGF-associated proteins across cancer lineages are HNRNPLL, UTP15, and XPO1. Each is linked with PIGF in more than 4 cancer types. Because this analysis shows association rather than direction, both PIGF-to-partner and partner-to-PIGF results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PIGF versus HNRNPLL in GBM, with a Pearson correlation of 0.38.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PIGF→partner) and Y-score (partner→PIGF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMHNRNPLL →+0.226+0.528<.001<.00135
LSCCUTP15 →+0.243+0.439.004<.00134
LSCCXPO1 →+0.360+0.640<.001<.00134
GBMRBM14 →+0.251+0.494<.001<.00134
LSCCNOL11 →+0.329+0.509.001<.00134
LSCCNOL6 →+0.240+0.487.002<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,117 associations by consensus.

PIGF vs HNRNPLL — GBM

Per-sample scatter of PIGF vs HNRNPLL in GBM (Pearson r = 0.38).

Explore this scatter interactively →

Exploration