PHF23

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, PHF23 mass-spec protein is linked to patient survival in 4 of 34 cancer types, making it a survival-associated PHF23 data layer compared with 25 for mass-spec protein and 3 for mutation status.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where higher PHF23 mass-spec protein is associated with better overall survival. In most high-consensus cancer types, elevated PHF23 expression acts as an unfavorable survival marker, although some lineages such as CCRCC and HNSC show a favorable association.

CCRCC, HNSC, and LSCC are the cancer types where PHF23 mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
CCRCCOSQuartileAll1.0000.840.0374view →
HNSCOSMedianAll1.0000.959.0234view →
LSCCOSTertileAll0.8840.691.0473view →
LUADOSMedianII,III,IV0.4670.907.0462view →
Pink = unfavorable, green = favorable. Showing the 4 strongest of 4 lineages.

PHF23–CCRCC (OS)

Kaplan–Meier survival curve for PHF23 mass-spec protein-high vs -low samples in CCRCC.

Open the CCRCC breakdown →

Exploration