PGLYRP1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PGLYRP1 mutation is significantly associated with the total protein of many other genes, with 3 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PGLYRP1-associated genes across cancer lineages are VHL, YAP_pS127, and eIF4E. Each is linked with PGLYRP1 in more than 1 cancer types. Because this analysis shows association rather than direction, both PGLYRP1-to-partner and partner-to-PGLYRP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, VHL grouped by PGLYRP1-low versus PGLYRP1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PGLYRP1→partner) and Y-score (partner→PGLYRP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECVHL →-0.993-3.169.007.02031
UCECYAP_pS127 →+0.409+3.000.021.03621
UCECeIF4E →+0.292+3.169.011.02011
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

VHL by PGLYRP1 expression — UCEC

Box plot of VHL in PGLYRP1-low vs PGLYRP1-high samples in UCEC.

Explore this box plot interactively →

Exploration