PGGT1BP2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PGGT1BP2 RNA expression is significantly associated with the protein abundance of many other proteins, with 4,765 significant associations in total. OV shows the largest number of these associations.

The most reproducible PGGT1BP2-associated proteins across cancer lineages are PTPN3_S425, PDS5A_T1208, and RBBP8_S327. Each is linked with PGGT1BP2 in more than 1 cancer types. Because this analysis shows association rather than direction, both PGGT1BP2-to-partner and partner-to-PGGT1BP2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PGGT1BP2→partner) and Y-score (partner→PGGT1BP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVPTPN3_S425 →+0.971+0.459.003.00532
OVPDS5A_T1208 →+0.774+0.284.001.00132
OVRBBP8_S327 →+0.715+0.257.008.00332
PDACMBIP →-0.212-0.155.003.00432
LSCCMINK1_S555 →+0.455+0.059.002.00132
BRCARBM12B_S638 →-0.521-0.313.008.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,765 associations by consensus.

Exploration