PGGT1BP2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PGGT1BP2 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,476 significant associations in total. STAD shows the largest number of these associations.

The most reproducible PGGT1BP2-associated GO terms across cancer lineages are Nucleobase-containing compound transport, COPII-coated vesicle budding, and Membrane fission. Each is linked with PGGT1BP2 in more than 18 cancer types. Because this analysis shows association rather than direction, both PGGT1BP2-to-partner and partner-to-PGGT1BP2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PGGT1BP2→partner) and Y-score (partner→PGGT1BP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADNucleobase-containing compound transport →+0.053+0.130<.001<.001319
ESCACOPII-coated vesicle budding →+0.065+0.147.001.001318
ESCAMembrane fission →+0.058+0.123<.001<.001318
STADGolgi organization →+0.049+0.122<.001<.001318
STADGolgi vesicle transport →+0.056+0.119<.001<.001317
STADRNA polymerase II preinitiation complex assembly →+0.049+0.124<.001<.001317
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,476 associations by consensus.

Exploration