PGBD4P4

Across TCGA patient cohorts, PGBD4P4 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,233 significant associations in total. ESCA shows the largest number of these associations.

The most reproducible PGBD4P4-associated GO terms across cancer lineages are Protein insertion into membrane, Detection of bacterium, and Glycosyl compound metabolic process. Each is linked with PGBD4P4 in more than 2 cancer types. Because this analysis shows association rather than direction, both PGBD4P4-to-partner and partner-to-PGBD4P4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein insertion into membrane grouped by PGBD4P4-low versus PGBD4P4-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PGBD4P4→partner) and Y-score (partner→PGBD4P4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Protein insertion into membrane →	+0.222	+0.017	<.001	.004	3	3
ESCA	Detection of bacterium →	+0.107	+0.010	<.001	.002	3	2
ESCA	Glycosyl compound metabolic process →	+0.147	+0.015	<.001	.005	3	2
ESCA	Organic acid transmembrane transport →	+0.114	+0.016	<.001	<.001	3	2
ESCA	Regulation of nervous system process →	+0.092	+0.010	<.001	.001	3	2
STAD	Neuron maturation →	+0.063	+0.025	<.001	.006	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,233 associations by consensus.

Protein insertion into membrane by PGBD4P4 expression — ESCA

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