PGAM1P11

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PGAM1P11 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,710 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PGAM1P11-associated proteins across cancer lineages are SNW1, EIF4A3, and HNRNPR. Each is linked with PGAM1P11 in more than 3 cancer types. Because this analysis shows association rather than direction, both PGAM1P11-to-partner and partner-to-PGAM1P11 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PGAM1P11 versus SNW1 in LSCC, with a Pearson correlation of 0.29.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PGAM1P11→partner) and Y-score (partner→PGAM1P11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSNW1 →+0.213+0.406<.001.00434
LSCCEIF4A3 →+0.352+0.597<.001<.00134
GBMHNRNPR →+0.293+0.464<.001<.00134
GBMIWS1 →+0.274+0.435<.001<.00134
GBMRPA1 →+0.300+0.479<.001<.00133
GBMSAP18 →+0.271+0.457<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,710 associations by consensus.

PGAM1P11 vs SNW1 — LSCC

Per-sample scatter of PGAM1P11 vs SNW1 in LSCC (Pearson r = 0.29).

Explore this scatter interactively →

Exploration