PFKFB4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PFKFB4 mutation is significantly associated with the RNA expression of many other genes, with 975 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PFKFB4-associated genes across cancer lineages are SNORD111B, FEN1, and PC. Each is linked with PFKFB4 in more than 1 cancer types. Because this analysis shows association rather than direction, both PFKFB4-to-partner and partner-to-PFKFB4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SNORD111B grouped by PFKFB4-low versus PFKFB4-high in GBM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PFKFB4→partner) and Y-score (partner→PFKFB4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMSNORD111B →+0.600+4.969<.001.00932
UCECFEN1 →+0.562+2.700.008.00632
UCECPC →+0.691+3.721<.001<.00132
UCECTIPIN →+0.452+2.523.002.00132
SKCMNAP1L4 →+0.484+3.516.006.00232
UCECDHRS2 →+0.985+2.772<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 975 associations by consensus.

SNORD111B by PFKFB4 expression — GBM

Box plot of SNORD111B in PFKFB4-low vs PFKFB4-high samples in GBM.

Explore this box plot interactively →

Exploration