PEDS1-UBE2V1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PEDS1-UBE2V1 mutation is significantly associated with the RNA expression of many other genes, with 1,512 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PEDS1-UBE2V1-associated genes across cancer lineages are MAP3K4-AS1, ZNHIT3, and CCL18. Each is linked with PEDS1-UBE2V1 in more than 1 cancer types. Because this analysis shows association rather than direction, both PEDS1-UBE2V1-to-partner and partner-to-PEDS1-UBE2V1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MAP3K4-AS1 grouped by PEDS1-UBE2V1-low versus PEDS1-UBE2V1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PEDS1-UBE2V1→partner) and Y-score (partner→PEDS1-UBE2V1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMAP3K4-AS1 →+0.636+2.815.003.00131
UCECZNHIT3 →+0.480+3.397.001.00431
UCECCCL18 →+1.513+3.708<.001<.00131
UCECFCGBP →-0.999-3.443.006.00531
UCECTUBGCP5 →+0.411+3.332.005.00531
UCECRN7SL43P →+0.133+2.019.005.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,512 associations by consensus.

MAP3K4-AS1 by PEDS1-UBE2V1 expression — UCEC

Box plot of MAP3K4-AS1 in PEDS1-UBE2V1-low vs PEDS1-UBE2V1-high samples in UCEC.

Explore this box plot interactively →

Exploration