PDZD8

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PDZD8 protein abundance is significantly associated with the RNA expression of many other genes, with 6,597 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PDZD8-associated genes across cancer lineages are APLF, COCH, and CEP128. Each is linked with PDZD8 in more than 3 cancer types. Because this analysis shows association rather than direction, both PDZD8-to-partner and partner-to-PDZD8 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PDZD8 versus APLF in CCRCC, with a Pearson correlation of -0.39.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PDZD8→partner) and Y-score (partner→PDZD8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCAPLF →-0.532-0.231<.001<.00133
HNSCCOCH →-1.096-0.330<.001<.00133
UCECCEP128 →-0.644-0.466<.001<.00133
UCECGINS1 →-0.810-0.375<.001.00133
LUADC4BPA →+1.762+0.257<.001.00233
LUADHROB →-0.816-0.207<.001.00333
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,597 associations by consensus.

PDZD8 vs APLF — CCRCC

Per-sample scatter of PDZD8 vs APLF in CCRCC (Pearson r = -0.39).

Explore this scatter interactively →

Exploration