PDZD8

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PDZD8 mutation is significantly associated with the RNA expression of many other genes, with 4,011 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PDZD8-associated genes across cancer lineages are SLC3A2, PPIL4, and MMS22L. Each is linked with PDZD8 in more than 2 cancer types. Because this analysis shows association rather than direction, both PDZD8-to-partner and partner-to-PDZD8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SLC3A2 grouped by PDZD8-low versus PDZD8-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PDZD8→partner) and Y-score (partner→PDZD8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSLC3A2 →+0.640+2.212<.001<.00133
UCECPPIL4 →+0.410+2.008.009.00133
UCECMMS22L →+0.312+1.872.005.00433
UCECMTA2 →+0.430+1.957<.001<.00132
UCECINCENP →+0.608+2.201<.001.00132
UCECEI24 →+0.406+1.893.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,011 associations by consensus.

SLC3A2 by PDZD8 expression — UCEC

Box plot of SLC3A2 in PDZD8-low vs PDZD8-high samples in UCEC.

Explore this box plot interactively →

Exploration