PDPR

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PDPR mutation is significantly associated with the total protein of many other genes, with 25 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PDPR-associated genes across cancer lineages are A-Raf_pS299, FOXO3a_pS318_S321, and JNK2. Each is linked with PDPR in more than 1 cancer types. Because this analysis shows association rather than direction, both PDPR-to-partner and partner-to-PDPR results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, A-Raf_pS299 grouped by PDPR-low versus PDPR-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PDPR→partner) and Y-score (partner→PDPR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECA-Raf_pS299 →-0.135-2.584.005.01031
UCECFOXO3a_pS318_S321 →-0.124-1.690.013.04231
UCECJNK2 →+0.304+2.348<.001.01831
UCECKu80 →+0.239+1.498.011.03631
UCECMEK1 →+0.399+2.222.006.01031
UCECp70-S6K_pT389 →-0.201-3.321.008.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 25 associations by consensus.

A-Raf_pS299 by PDPR expression — UCEC

Box plot of A-Raf_pS299 in PDPR-low vs PDPR-high samples in UCEC.

Explore this box plot interactively →

Exploration