PDE8A

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PDE8A mutation is significantly associated with the RNA expression of many other genes, with 3,144 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PDE8A-associated genes across cancer lineages are GTPBP4, MIR1302-5, and RNA5SP412. Each is linked with PDE8A in more than 2 cancer types. Because this analysis shows association rather than direction, both PDE8A-to-partner and partner-to-PDE8A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GTPBP4 grouped by PDE8A-low versus PDE8A-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PDE8A→partner) and Y-score (partner→PDE8A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECGTPBP4 →+0.403+3.513.004.00233
LUADMIR1302-5 →+0.303+5.044<.001.00933
UCECRNA5SP412 →+0.530+1.719<.001.00633
UCECRN7SKP230 →+0.245+2.215.001<.00133
LIHCOR5J1P →+0.014+4.495<.001.00332
COADSNORD114-9 →+0.726+5.412<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,144 associations by consensus.

GTPBP4 by PDE8A expression — UCEC

Box plot of GTPBP4 in PDE8A-low vs PDE8A-high samples in UCEC.

Explore this box plot interactively →

Exploration