PDE7B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PDE7B protein abundance is significantly associated with the RNA expression of many other genes, with 722 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PDE7B-associated genes across cancer lineages are ASF1A, CDC40, and CXCR2. Each is linked with PDE7B in more than 1 cancer types. Because this analysis shows association rather than direction, both PDE7B-to-partner and partner-to-PDE7B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PDE7B versus ASF1A in LSCC, with a Pearson correlation of -0.56.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PDE7B→partner) and Y-score (partner→PDE7B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCASF1A →-0.694-1.504<.001<.00132
LSCCCDC40 →-0.673-1.396.004.00232
LSCCCXCR2 →+2.340+2.385.003.00132
LSCCMIR3657 →-1.056-1.495.008.00332
LSCCARMCX5-GPRASP2 →-0.580-1.454<.001.00132
UCECEIF3E →-0.754-0.562.005.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 722 associations by consensus.

PDE7B vs ASF1A — LSCC

Per-sample scatter of PDE7B vs ASF1A in LSCC (Pearson r = -0.56).

Explore this scatter interactively →

Exploration