PDE4DIPP3

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PDE4DIPP3 RNA expression is significantly associated with the RNA expression of many other genes, with 4,600 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PDE4DIPP3-associated genes across cancer lineages are FCGR1CP, PDE4DIPP7, and FCGR1B. Each is linked with PDE4DIPP3 in more than 18 cancer types. Because this analysis shows association rather than direction, both PDE4DIPP3-to-partner and partner-to-PDE4DIPP3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PDE4DIPP3 versus FCGR1CP in LGG, with a Pearson correlation of 0.62.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PDE4DIPP3→partner) and Y-score (partner→PDE4DIPP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LGGFCGR1CP →+1.029+0.201<.001<.001319
LAMLPDE4DIPP7 →+1.278+0.356<.001<.001318
LGGFCGR1B →+0.769+0.176<.001<.001316
SKCMGIMAP1 →+0.729+0.014<.001<.001316
LAMLPDE4DIPP4 →+0.976+0.447<.001<.001315
SKCMPCED1B-AS1 →+0.923+0.014<.001<.001314
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,600 associations by consensus.

PDE4DIPP3 vs FCGR1CP — LGG

Per-sample scatter of PDE4DIPP3 vs FCGR1CP in LGG (Pearson r = 0.62).

Explore this scatter interactively →

Exploration