PDE4DIP

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PDE4DIP RNA expression is significantly associated with the protein abundance of many other proteins, with 18,034 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible PDE4DIP-associated proteins across cancer lineages are LRPPRC, UTP11, and DDX28. Each is linked with PDE4DIP in more than 5 cancer types. Because this analysis shows association rather than direction, both PDE4DIP-to-partner and partner-to-PDE4DIP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PDE4DIP versus LRPPRC in LSCC, with a Pearson correlation of -0.33.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PDE4DIP→partner) and Y-score (partner→PDE4DIP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCLRPPRC →-0.478-0.409<.001.00636
LSCCUTP11 →-0.470-0.406<.001.00235
LSCCDDX28 →-0.565-0.601<.001<.00135
LSCCHSPD1 →-0.466-0.347<.001.00526
LSCCPTCD3 →-0.395-0.593<.001<.00135
LSCCACAD9 →-0.428-0.467<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,034 associations by consensus.

PDE4DIP vs LRPPRC — LSCC

Per-sample scatter of PDE4DIP vs LRPPRC in LSCC (Pearson r = -0.33).

Explore this scatter interactively →

Exploration