PDE4D

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PDE4D protein abundance is significantly associated with the RNA expression of many other genes, with 11,128 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible PDE4D-associated genes across cancer lineages are NDUFB4P2, FGF7, and C7. Each is linked with PDE4D in more than 5 cancer types. Because this analysis shows association rather than direction, both PDE4D-to-partner and partner-to-PDE4D results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PDE4D versus NDUFB4P2 in LUAD, with a Pearson correlation of 0.77.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PDE4D→partner) and Y-score (partner→PDE4D) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADNDUFB4P2 →+1.718+0.870<.001<.00136
COADFGF7 →+1.077+0.422<.001<.00135
UCECC7 →+1.696+0.508<.001<.00134
GBMPDE1A →+1.152+0.516<.001<.00134
GBMNECAB1 →+0.898+0.360<.001<.00134
HNSCLYVE1 →+1.423+0.344<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,128 associations by consensus.

PDE4D vs NDUFB4P2 — LUAD

Per-sample scatter of PDE4D vs NDUFB4P2 in LUAD (Pearson r = 0.77).

Explore this scatter interactively →

Exploration