PDE2A

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PDE2A mutation is significantly associated with the RNA expression of many other genes, with 172 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible PDE2A-associated genes across cancer lineages are DEFB108B, TEX13A, and UNC93A. Each is linked with PDE2A in more than 1 cancer types. Because this analysis shows association rather than direction, both PDE2A-to-partner and partner-to-PDE2A results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PDE2A→partner) and Y-score (partner→PDE2A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaDEFB108B →+0.127+4.269<.001.00232
LUNG_NSCLC_LUADTEX13A →+0.008+3.189.004.00732
BLOOD_LeukemiaUNC93A →+0.154+3.944<.001.00631
BLOOD_LeukemiaVSX2 →+0.026+4.258.002.00231
BLOOD_LeukemiaC20orf85 →+0.041+5.554<.001<.00131
BLOOD_LeukemiaIL22 →+0.030+4.984<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 172 associations by consensus.

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