PDE2A-AS2

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, PDE2A-AS2 RNA differs between tumor and matched normal tissue in 8 of 18 cancer types tested, making tumor–normal expression one of PDE2A-AS2’s most consistent transcriptional readouts.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where PDE2A-AS2 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types PDE2A-AS2 is over-expressed in tumor, although a few such as COAD and KICH show the opposite, repressed pattern.

HNSC, KIRC, and BRCA are the cancer types where PDE2A-AS2 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in PDE2A-AS2 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
HNSCMaleAll+0.849<.00112view →
KIRCAllIV+0.544<.00112view →
BRCAAllIII,IV+0.414<.0016view →
COADFemaleIV−0.825.0154view →
KICHAllAll−0.355.0033view →
LUADAllIII,IV−0.323.0243view →
ESCAAllII,III,IV+1.089.0222view →
LIHCMaleAll−0.211.0051view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 8 strongest of 8 lineages.

PDE2A-AS2–HNSC

Tumor-vs-normal expression box plot for PDE2A-AS2 RNA in HNSC.

Open the HNSC breakdown →

Exploration