PDCL

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PDCL mutation is significantly associated with the total protein of many other genes, with 24 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PDCL-associated genes across cancer lineages are STAT3_pY705, 14-3-3_beta, and EGFR_pY1068. Each is linked with PDCL in more than 1 cancer types. Because this analysis shows association rather than direction, both PDCL-to-partner and partner-to-PDCL results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, STAT3_pY705 grouped by PDCL-low versus PDCL-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PDCL→partner) and Y-score (partner→PDCL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSTAT3_pY705 →-0.477-2.700<.001.00532
UCEC14-3-3_beta →-0.092-3.143.031.01831
UCECEGFR_pY1068 →-0.287-2.222.007.01131
UCECeIF4E →+0.227+2.906.011.00131
UCECA-Raf_pS299 →-0.167-3.169<.001.01831
UCECFoxM1 →+0.239+2.906.029.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 24 associations by consensus.

STAT3_pY705 by PDCL expression — UCEC

Box plot of STAT3_pY705 in PDCL-low vs PDCL-high samples in UCEC.

Explore this box plot interactively →

Exploration