PDCD6IP

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PDCD6IP RNA expression is significantly associated with the protein abundance of many other proteins, with 12,564 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible PDCD6IP-associated proteins across cancer lineages are CRELD2, IRF4, and WDR48. Each is linked with PDCD6IP in more than 4 cancer types. Because this analysis shows association rather than direction, both PDCD6IP-to-partner and partner-to-PDCD6IP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PDCD6IP versus CRELD2 in PDAC, with a Pearson correlation of -0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PDCD6IP→partner) and Y-score (partner→PDCD6IP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACCRELD2 →-0.425-0.322<.001.00135
BRCAIRF4 →-0.799-0.613<.001<.00135
LSCCWDR48 →+0.199+0.327.001.00235
BRCAPTPN23 →+0.273+0.601<.001<.00134
PDACFLNB →+0.445+0.287<.001<.00134
PDACCKAP4_S26 →-0.432-0.217<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,564 associations by consensus.

PDCD6IP vs CRELD2 — PDAC

Per-sample scatter of PDCD6IP vs CRELD2 in PDAC (Pearson r = -0.40).

Explore this scatter interactively →

Exploration