PDCD6

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PDCD6 protein abundance is significantly associated with the RNA expression of many other genes, with 7,998 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible PDCD6-associated genes across cancer lineages are CCDC127, BRD9, and MTRR. Each is linked with PDCD6 in more than 8 cancer types. Because this analysis shows association rather than direction, both PDCD6-to-partner and partner-to-PDCD6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PDCD6 versus CCDC127 in HNSC, with a Pearson correlation of 0.51.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PDCD6→partner) and Y-score (partner→PDCD6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCCCDC127 →+0.908+0.335<.001<.00139
HNSCBRD9 →+0.587+0.227<.001<.00135
HNSCMTRR →+0.498+0.262.002<.00135
LUADSDHA →+0.390+0.233<.001<.00135
GBMCFAP94 →+0.841+0.242<.001.00434
UCECSPEF2 →+0.756+0.144<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,998 associations by consensus.

PDCD6 vs CCDC127 — HNSC

Per-sample scatter of PDCD6 vs CCDC127 in HNSC (Pearson r = 0.51).

Explore this scatter interactively →

Exploration