PCSK1N

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PCSK1N protein abundance is significantly associated with the RNA expression of many other genes, with 15,992 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PCSK1N-associated genes across cancer lineages are DUSP26, PPP1R1A, and CTNNA3. Each is linked with PCSK1N in more than 3 cancer types. Because this analysis shows association rather than direction, both PCSK1N-to-partner and partner-to-PCSK1N results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PCSK1N versus DUSP26 in HNSC, with a Pearson correlation of 0.54.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PCSK1N→partner) and Y-score (partner→PCSK1N) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCDUSP26 →+2.411+2.161<.001.00234
HNSCPPP1R1A →+1.346+2.477<.001<.00134
HNSCCTNNA3 →+1.320+2.041<.001<.00134
COADADH1B →+1.500+1.060.002<.00134
GBMCRHBP →+0.942+0.476<.001<.00134
LSCCMAP6 →+0.725+0.678.006.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,992 associations by consensus.

PCSK1N vs DUSP26 — HNSC

Per-sample scatter of PCSK1N vs DUSP26 in HNSC (Pearson r = 0.54).

Explore this scatter interactively →

Exploration