PCNP

Across TCGA patient cohorts, PCNP RNA expression is significantly associated with the protein abundance of many other proteins, with 11,467 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible PCNP-associated proteins across cancer lineages are UMPS, NIT2, and YTHDC1. Each is linked with PCNP in more than 4 cancer types. Because this analysis shows association rather than direction, both PCNP-to-partner and partner-to-PCNP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PCNP versus UMPS in LSCC, with a Pearson correlation of 0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PCNP→partner) and Y-score (partner→PCNP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	UMPS →	+0.410	+0.666	<.001	<.001	3	5
PDAC	NIT2 →	+0.425	+0.346	<.001	<.001	3	5
HNSC	YTHDC1 →	+0.234	+0.775	.003	.004	3	4
LSCC	WRNIP1 →	+0.419	+0.528	<.001	<.001	3	4
HNSC	TPR →	+0.173	+0.746	<.001	.005	3	4
LSCC	PPIG →	+0.226	+0.428	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,467 associations by consensus.

PCNP vs UMPS — LSCC

Explore this scatter interactively →