Across TCGA patient cohorts, PCGF3 mutation is significantly associated with the RNA expression of many other genes, with 3,024 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PCGF3-associated genes across cancer lineages are MIR8076, RNA5SP325, and MIR1296. Each is linked with PCGF3 in more than 2 cancer types. Because this analysis shows association rather than direction, both PCGF3-to-partner and partner-to-PCGF3 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PCGF3→partner) and Y-score (partner→PCGF3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	MIR8076 →	+0.386	+5.332	.009	.002	3	3
CESC	RNA5SP325 →	+0.144	+4.516	<.001	.004	3	2
COAD	MIR1296 →	+0.799	+3.792	<.001	.007	3	2
CESC	IGHD4-4 →	+1.089	+3.424	<.001	.007	3	2
CESC	RN7SL660P →	+0.137	+3.890	<.001	.001	3	2
COAD	FRG2 →	+0.047	+4.868	<.001	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,024 associations by consensus.

Exploration

PCGF3 survival (RNA) · tumor vs normal (RNA) · all PCGF3 data types