PCDHB5

Across TCGA patient cohorts, PCDHB5 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,876 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PCDHB5-associated proteins across cancer lineages are PDGFC, C1orf198, and HSPG2. Each is linked with PCDHB5 in more than 3 cancer types. Because this analysis shows association rather than direction, both PCDHB5-to-partner and partner-to-PCDHB5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PCDHB5 versus PDGFC in LSCC, with a Pearson correlation of 0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PCDHB5→partner) and Y-score (partner→PCDHB5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	PDGFC →	+0.747	+1.136	<.001	<.001	3	4
COAD	C1orf198 →	+0.304	+0.305	<.001	<.001	3	4
BRCA	HSPG2 →	+0.691	+0.986	<.001	<.001	3	4
LUAD	RNF213 →	-0.390	-0.974	<.001	<.001	3	4
CCRCC	SRPX2 →	+0.910	+1.042	.001	.002	3	4
CCRCC	ISG20 →	-0.546	-0.932	<.001	.002	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,876 associations by consensus.

PCDHB5 vs PDGFC — LSCC

Explore this scatter interactively →