PCDH9-AS4

Across TCGA patient cohorts, PCDH9-AS4 RNA expression is significantly associated with the protein abundance of many other proteins, with 6,357 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PCDH9-AS4-associated proteins across cancer lineages are FERMT2, NES_S1418, and ZNRF2_S135. Each is linked with PCDH9-AS4 in more than 3 cancer types. Because this analysis shows association rather than direction, both PCDH9-AS4-to-partner and partner-to-PCDH9-AS4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PCDH9-AS4 versus FERMT2 in HNSC, with a Pearson correlation of 0.29.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PCDH9-AS4→partner) and Y-score (partner→PCDH9-AS4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	FERMT2 →	+0.335	+0.664	<.001	<.001	3	4
HNSC	NES_S1418 →	+0.781	+0.601	<.001	.002	3	4
LSCC	ZNRF2_S135 →	-0.383	-0.318	.008	.005	3	3
PDAC	TBX2_S360 →	+0.636	+0.722	<.001	<.001	3	3
HNSC	TLN2 →	+0.396	+0.630	<.001	.001	3	3
HNSC	TNS1 →	+0.328	+0.736	.002	.002	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,357 associations by consensus.

PCDH9-AS4 vs FERMT2 — HNSC

Explore this scatter interactively →