Across TCGA patient cohorts, PCDH9-AS3 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,231 significant associations in total. STAD shows the largest number of these associations.

The most reproducible PCDH9-AS3-associated GO terms across cancer lineages are Respiratory electron transport chain, Neuron projection regeneration, and Protein neddylation. Each is linked with PCDH9-AS3 in more than 8 cancer types. Because this analysis shows association rather than direction, both PCDH9-AS3-to-partner and partner-to-PCDH9-AS3 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PCDH9-AS3→partner) and Y-score (partner→PCDH9-AS3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Respiratory electron transport chain →	+0.101	+0.126	<.001	<.001	3	9
STAD	Neuron projection regeneration →	+0.076	+0.127	<.001	<.001	3	8
STAD	Protein neddylation →	+0.095	+0.144	<.001	<.001	3	8
STAD	Regulation of mRNA catabolic process →	+0.078	+0.136	<.001	<.001	3	8
STAD	Protein folding →	+0.092	+0.131	<.001	<.001	3	8
STAD	Protein export from nucleus →	+0.083	+0.125	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,231 associations by consensus.

Exploration

PCDH9-AS3 survival (RNA) · tumor vs normal (RNA) · all PCDH9-AS3 data types