PCBP4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PCBP4 protein abundance is significantly associated with the RNA expression of many other genes, with 11,201 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PCBP4-associated genes across cancer lineages are ANLN, STMN1, and KIF2C. Each is linked with PCBP4 in more than 3 cancer types. Because this analysis shows association rather than direction, both PCBP4-to-partner and partner-to-PCBP4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PCBP4 versus ANLN in LUAD, with a Pearson correlation of 0.39.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PCBP4→partner) and Y-score (partner→PCBP4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADANLN →+1.016+0.464.001<.00134
BRCASTMN1 →+0.788+0.436<.001<.00134
LUADKIF2C →+1.101+0.374<.001<.00134
UCECTUBB →+0.541+0.297.001.00834
BRCAYBX1 →+0.924+0.631<.001<.00133
BRCAATP2A3 →-1.188-0.367.001.00533
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,201 associations by consensus.

PCBP4 vs ANLN — LUAD

Per-sample scatter of PCBP4 vs ANLN in LUAD (Pearson r = 0.39).

Explore this scatter interactively →

Exploration