PCAT5

Across TCGA patient cohorts, PCAT5 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,062 significant associations in total. STAD shows the largest number of these associations.

The most reproducible PCAT5-associated GO terms across cancer lineages are Regulation of double-strand break repair via homologous recombination, Neural tube formation, and Cytoskeleton-dependent intracellular transport. Each is linked with PCAT5 in more than 14 cancer types. Because this analysis shows association rather than direction, both PCAT5-to-partner and partner-to-PCAT5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of double-strand break repair via homologous recombination grouped by PCAT5-low versus PCAT5-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PCAT5→partner) and Y-score (partner→PCAT5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of double-strand break repair via homologous recombination →	+0.073	+0.121	<.001	<.001	3	15
STAD	Neural tube formation →	+0.064	+0.108	<.001	<.001	3	15
STAD	Cytoskeleton-dependent intracellular transport →	+0.062	+0.136	<.001	<.001	3	15
STAD	RNA 3'-end processing →	+0.073	+0.127	<.001	<.001	3	15
STAD	mRNA 3'-end processing →	+0.073	+0.120	<.001	<.001	3	15
ESCA	Regulation of stem cell population maintenance →	+0.064	+0.080	<.001	<.001	3	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,062 associations by consensus.

Regulation of double-strand break repair via homologous recombination by PCAT5 expression — STAD

Explore this box plot interactively →