P4HA3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, P4HA3 mutation is significantly associated with the RNA expression of many other genes, with 2,332 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible P4HA3-associated genes across cancer lineages are IGHVII-15-1, OR8B6P, and MIR4314. Each is linked with P4HA3 in more than 3 cancer types. Because this analysis shows association rather than direction, both P4HA3-to-partner and partner-to-P4HA3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, IGHVII-15-1 grouped by P4HA3-low versus P4HA3-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (P4HA3→partner) and Y-score (partner→P4HA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCIGHVII-15-1 →+0.640+5.309<.001.00334
LUSCOR8B6P →+0.239+4.882<.001.00534
LIHCMIR4314 →+0.738+6.902<.001<.00133
SKCMCHCHD4P5 →+0.036+2.232<.001.00633
SKCMPRAMEF30P →+0.020+2.068.004.00633
COADOR2G2 →+0.060+5.003<.001.00433
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,332 associations by consensus.

IGHVII-15-1 by P4HA3 expression — LUSC

Box plot of IGHVII-15-1 in P4HA3-low vs P4HA3-high samples in LUSC.

Explore this box plot interactively →

Exploration