OTUD4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, OTUD4 protein abundance is significantly associated with the RNA expression of many other genes, with 10,900 significant associations in total. GBM shows the largest number of these associations.

The most reproducible OTUD4-associated genes across cancer lineages are GNLY, DDX60, and IL15. Each is linked with OTUD4 in more than 5 cancer types. Because this analysis shows association rather than direction, both OTUD4-to-partner and partner-to-OTUD4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, OTUD4 versus GNLY in COAD, with a Pearson correlation of 0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (OTUD4→partner) and Y-score (partner→OTUD4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADGNLY →+1.420+0.412<.001<.00136
HNSCDDX60 →+0.937+0.152<.001<.00136
OVIL15 →+0.769+0.238<.001.00136
HNSCCASP4 →+0.653+0.133.001.00436
HNSCIFI35 →+1.408+0.188<.001<.00136
LSCCNFKB1 →+0.407+0.205<.001.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,900 associations by consensus.

OTUD4 vs GNLY — COAD

Per-sample scatter of OTUD4 vs GNLY in COAD (Pearson r = 0.42).

Explore this scatter interactively →

Exploration