OSMR-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, OSMR-AS1 RNA differs between tumor and matched normal tissue in 12 of 18 cancer types tested, making tumor–normal expression one of OSMR-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where OSMR-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types OSMR-AS1 is over-expressed in tumor, although a few such as KICH and THCA show the opposite, repressed pattern.

HNSC, KIRC, and KICH are the cancer types where OSMR-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in OSMR-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
HNSCMaleAll+0.515<.00111view →
KIRCMaleAll+0.350<.0019view →
KICHFemaleII,III,IV−1.051<.0018view →
LUSCMaleAll+0.400.0013view →
THCAAllAll−0.198<.0013view →
LIHCAllAll+0.164.0013view →
BLCAMaleIV−0.527.0042view →
KIRPAllII,III,IV+0.361.0362view →
UCECAllAll−0.356.0042view →
LUSCMaleIII,IV−0.714.0481view →
CHOLAllAll+0.585.0071view →
ESCAAllAll+0.403.0421view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 12 lineages.

OSMR-AS1–HNSC

Tumor-vs-normal expression box plot for OSMR-AS1 RNA in HNSC.

Open the HNSC breakdown →

Exploration