OSBP

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, OSBP mutation is significantly associated with the RNA expression of many other genes, with 104 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible OSBP-associated genes across cancer lineages are PRSS58, MMP26, and OR51L1. Each is linked with OSBP in more than 1 cancer types. Because this analysis shows association rather than direction, both OSBP-to-partner and partner-to-OSBP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PRSS58 grouped by OSBP-low versus OSBP-high in PANCREAS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (OSBP→partner) and Y-score (partner→OSBP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASPRSS58 →+0.092+5.000<.001.00631
LUNG_NSCLC_LUADMMP26 →+0.231+4.947<.001.00131
LUNG_NSCLC_LUADOR51L1 →+0.030+4.662.004.00531
LUNG_NSCLC_LUADNPAP1 →+0.104+4.662<.001.00531
LUNG_NSCLC_LUADLCE1B →+0.047+4.371<.001.00531
LUNG_NSCLC_LUADOR5H8 →+0.014+4.662<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 104 associations by consensus.

PRSS58 by OSBP expression — PANCREAS

Box plot of PRSS58 in OSBP-low vs OSBP-high samples in PANCREAS.

Explore this box plot interactively →

Exploration