OR52W1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, OR52W1 mutation is significantly associated with the RNA expression of many other genes, with 9 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible OR52W1-associated genes across cancer lineages are C6orf118, TCF15, and DEFA4. Each is linked with OR52W1 in more than 1 cancer types. Because this analysis shows association rather than direction, both OR52W1-to-partner and partner-to-OR52W1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, C6orf118 grouped by OR52W1-low versus OR52W1-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (OR52W1→partner) and Y-score (partner→OR52W1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEC6orf118 →+0.148+4.378<.001<.00131
LARGE_INTESTINETCF15 →+0.350+2.878.007.00931
LARGE_INTESTINEDEFA4 →+0.022+3.700<.001.00931
LARGE_INTESTINEGPR171 →+0.014+3.103.001.00431
LARGE_INTESTINENPY2R →+0.003+3.217<.001.00631
LARGE_INTESTINEBPIFA1 →+0.109+3.103.005.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

C6orf118 by OR52W1 expression — LARGE_INTESTINE

Box plot of C6orf118 in OR52W1-low vs OR52W1-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration