OR13J1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, OR13J1 mutation is significantly associated with the RNA expression of many other genes, with 7 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible OR13J1-associated genes across cancer lineages are SMYD1, LCE1C, and CTXN3. Each is linked with OR13J1 in more than 1 cancer types. Because this analysis shows association rather than direction, both OR13J1-to-partner and partner-to-OR13J1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SMYD1 grouped by OR13J1-low versus OR13J1-high in PANCREAS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (OR13J1→partner) and Y-score (partner→OR13J1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASSMYD1 →+0.010+3.491<.001.00831
BLOOD_LeukemiaLCE1C →+0.432+4.922.002.00931
BLOOD_LeukemiaCTXN3 →+0.012+5.201<.001.00631
BLOOD_LeukemiaSLC5A8 →+0.182+5.201<.001.00631
BLOOD_LeukemiaOR10A6 →+0.044+5.201<.001.00631
BLOOD_LeukemiaCFHR2 →+0.395+5.539<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

SMYD1 by OR13J1 expression — PANCREAS

Box plot of SMYD1 in OR13J1-low vs OR13J1-high samples in PANCREAS.

Explore this box plot interactively →

Exploration