OPA1-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, OPA1-AS1 RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of OPA1-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in bladder urothelial carcinoma (BLCA), where OPA1-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types OPA1-AS1 is over-expressed in tumor, although a few such as THCA show the opposite, repressed pattern.

BLCA, LUSC, and THCA are the cancer types where OPA1-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in OPA1-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
BLCAAllAll+0.551.0047view →
LUSCAllAll+0.318<.0016view →
THCAAllAll−0.220<.0015view →
HNSCAllAll+0.126.0015view →
STADAllAll+0.284.0054view →
KIRCAllAll+0.120.0053view →
KIRPAllIV+0.327.0162view →
ESCAFemaleAll+0.450.0161view →
CHOLAllAll+0.268.0331view →
READFemaleAll+0.223.0131view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 10 strongest of 10 lineages.

Exploration