NXN

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NXN mutation is significantly associated with the RNA expression of many other genes, with 1,944 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NXN-associated genes across cancer lineages are RN7SL93P, MIR8082, and OXSM. Each is linked with NXN in more than 1 cancer types. Because this analysis shows association rather than direction, both NXN-to-partner and partner-to-NXN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL93P grouped by NXN-low versus NXN-high in PRAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NXN→partner) and Y-score (partner→NXN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PRADRN7SL93P →+0.702+6.453<.001.00132
UCECMIR8082 →+0.270+2.183.005.00932
UCECOXSM →+0.398+2.332.001.00332
UCECNUDCD2 →+0.520+3.021.002<.00132
UCECUBE2T →+0.697+2.364.003.00332
UCECTMED2 →+0.543+3.332.009.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,944 associations by consensus.

RN7SL93P by NXN expression — PRAD

Box plot of RN7SL93P in NXN-low vs NXN-high samples in PRAD.

Explore this box plot interactively →

Exploration